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See other COL4A1 GE Assays ›
Gene Symbol:
COL4A1
Gene Name:
collagen type IV alpha 1 chain
Gene Aliases:
BSVD, RATOR
Chromosome Location:
Chr.13: 110148958 - 110307157 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01007475_mH
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Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: COL4A1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001303110.1 NP_001290039.1 8 - 9 604 105
NM_001845.5 NP_001836.3 8 - 9 604 105
XM_011521048.2 XP_011519350.1 8 - 9 8536 105
GenBank mRNA AB209646.1 - 8 - 9 589 105
BC142626.1 - 8 - 9 578 105
BC151220.1 - 8 - 9 588 40148649 105
CD613007.1 - 5 - 6 251 105
X05561.1 - 8 - 9 596 105
Y00706.1 - 6 - 7 339 105

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1300009781.hg.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene COL4A1

Panther Classification:

Molecular Function -

extracellular matrix structural protein

Gene Ontology Categories:

Function(s) Process(es)

patterning of blood vessels
brain development
neuromuscular junction development
extracellular matrix organization
collagen catabolic process
epithelial cell differentiation
blood vessel morphogenesis
retinal blood vessel morphogenesis
renal tubule morphogenesis
cellular response to amino acid stimulus
basement membrane organization
extracellular matrix structural constituent
protein binding
extracellular matrix constituent conferring elasticity
platelet-derived growth factor binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Clariom D Assay PSR1300165213.hg.1 ENST00000375820.8 Ensembl
Affymetrix Human Clariom D Assay PSR1300165213.hg.1 ENST00000543140.5 Ensembl
Affymetrix Human Clariom D Assay PSR1300165213.hg.1 ENST00000615732.1 Ensembl
Affymetrix Human Clariom D Assay PSR1300165213.hg.1 NM_001303110.1 Refseq
Affymetrix Human Clariom D Assay PSR1300165213.hg.1 NM_001845.5 Refseq
Affymetrix Human Clariom D Assay PSR1300165213.hg.1 ENST00000375820.8 Ensembl
Affymetrix Human Clariom D Assay PSR1300165213.hg.1 ENST00000543140.5 Ensembl
Affymetrix Human Clariom D Assay PSR1300165213.hg.1 ENST00000615732.1 Ensembl
Affymetrix Human Clariom D Assay PSR1300165213.hg.1 NM_001303110.1 Refseq
Affymetrix Human Clariom D Assay PSR1300165213.hg.1 NM_001845.5 Refseq
Affymetrix Human Clariom D Assay PSR1300165213.hg.1 TC1300009781.hg.1 Clariom D TC

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