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See other COL4A1 GE Assays ›
Gene Symbol:
COL4A1
Gene Name:
collagen type IV alpha 1 chain
Gene Aliases:
BSVD, RATOR
Chromosome Location:
Chr.13: 110148958 - 110307157 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01007466_m1
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Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: COL4A1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001845.5 NP_001836.3 45 - 46 4155 107
XM_011521048.2 XP_011519350.1 45 - 46 12087 107
GenBank mRNA AB209646.1 - 38 - 39 3086 107
BC047305.1 - 20 - 21 2244 107
BC151220.1 - 45 - 46 4139 40148649 107
M11315.1 - 3 - 4 251 107

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1300009781.hg.1
This assay targets the same location as HTA transcript cluster(s) TC13000872.hg.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene COL4A1

Panther Classification:

Molecular Function -

extracellular matrix structural protein

Gene Ontology Categories:

Function(s) Process(es)

patterning of blood vessels
brain development
neuromuscular junction development
extracellular matrix organization
collagen catabolic process
epithelial cell differentiation
blood vessel morphogenesis
retinal blood vessel morphogenesis
renal tubule morphogenesis
cellular response to amino acid stimulus
basement membrane organization
extracellular matrix structural constituent
protein binding
extracellular matrix constituent conferring elasticity
platelet-derived growth factor binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR13009715.hg.1 ENST00000375815.4 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR13009715.hg.1 ENST00000375820.4 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR13009715.hg.1 ENST00000397198.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR13009715.hg.1 NM_001845.5 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR13009715.hg.1 TC13000872.hg.1 HTA TC
Affymetrix Human Clariom D Assay PSR1300165173.hg.1 ENST00000375820.8 Ensembl
Affymetrix Human Clariom D Assay PSR1300165173.hg.1 NM_001845.5 Refseq
Affymetrix Human Clariom D Assay PSR1300165173.hg.1 ENST00000375820.8 Ensembl
Affymetrix Human Clariom D Assay PSR1300165173.hg.1 NM_001845.5 Refseq
Affymetrix Human Clariom D Assay PSR1300165173.hg.1 TC1300009781.hg.1 Clariom D TC

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