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See other CAST GE Assays ›
Gene Symbol:
CAST
Gene Name:
calpastatin
Gene Aliases:
BS-17, PLACK
Chromosome Location:
Chr.5: 96662037 - 96774683 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs00987953_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: CAST
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001190442.1 NP_001177371.1 5 - 6 387 87
XM_006714696.3 XP_006714759.1 6 - 7 490 87
XM_006714697.3 XP_006714760.1 5 - 6 507 87
XM_006714698.3 XP_006714761.1 5 - 6 507 87
XM_006714699.3 XP_006714762.1 5 - 6 431 87
XM_006714700.3 XP_006714763.1 5 - 6 507 87
XM_006714702.3 XP_006714765.1 5 - 6 399 87
XM_006714707.3 XP_006714770.1 3 - 4 253 87
XM_006714708.3 XP_006714771.1 3 - 4 252 87
XM_006714709.3 XP_006714772.1 3 - 4 233 87
XM_011543654.2 XP_011541956.1 5 - 6 507 87
XM_011543655.2 XP_011541957.1 5 - 6 507 87
XM_017009911.1 XP_016865400.1 5 - 6 507 87
XM_017009912.1 XP_016865401.1 6 - 7 518 87
XM_017009913.1 XP_016865402.1 6 - 7 505 87
XM_017009914.1 XP_016865403.1 5 - 6 507 87
XM_017009917.1 XP_016865406.1 5 - 6 423 87
XM_017009918.1 XP_016865407.1 5 - 6 507 87
XM_017009919.1 XP_016865408.1 5 - 6 507 87
XM_017009924.1 XP_016865413.1 5 - 6 507 87
XM_017009927.1 XP_016865416.1 3 - 4 252 87
XM_017009928.1 XP_016865417.1 3 - 4 290 87
XM_017009930.1 XP_016865419.1 3 - 4 233 87
GenBank mRNA AB026049.1 - 3 - 4 239 87
AB208816.1 - 5 - 6 351 87
AK297879.1 - 3 - 4 165 87
AK298541.1 - 3 - 4 253 87
AK299402.1 - 3 - 4 233 87
BQ893654.1 - 5 - 6 330 87
CD702474.1 - 3 - 4 284 87
D16217.1 - 3 - 4 246 87
M86258.1 - 2 - 3 84 87

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More Information


Additional Information:

This assay is in the 5'UTR region of the AB026049.1,AK298541.1 transcripts.
Based on assay re-evaluation, this assay may detect transcript(s) from off target gene(s). Please contact Tech Support if you need more information.

Set Membership:

Amplicon length between 86 and 100 Homo sapiens Probe spans exons

Panther Classification:

Molecular Function -

protein-binding activity modulator protease inhibitor

Gene Ontology Categories:

Function(s) Process(es)

liver development
egg activation
brain development
myoblast fusion
aging
negative regulation of endopeptidase activity
organ regeneration
myoblast differentiation
negative regulation of cell cycle arrest
cell-cell adhesion
negative regulation of type B pancreatic cell apoptotic process
protease binding
endopeptidase inhibitor activity
protein binding
calcium-dependent cysteine-type endopeptidase inhibitor activity
poly(A) RNA binding
cadherin binding involved in cell-cell adhesion

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