Assay Details

Gene Symbol: CDK9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001261.3	NP_001252.1	1 - 2	215		98
RefSeq	XM_017014184.1	XP_016869673.1	1 - 2	81		98
GenBank mRNA	AB451289.1	-	1 - 2	92		98
	AB451421.1	-	1 - 2	92		98
	AK313828.1	-	1 - 2	144		98
	BC001968.1	-	1 - 2	152	3460767	98
	BT019903.1	-	1 - 2	92		98
	DB120461.1	-	1 - 2	215		98
	L25676.1	-	1 - 2	156		98
	X80230.1	-	1 - 2	190		98

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900012175.hg
This assay targets the same location as HTA transcript cluster(s) TC09000671.hg

Additional Information:

This assay is in the 5'UTR region of the XM_017014184.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

Protein Kinase

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CDK9

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000491521.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000491521.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000491521.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000491521.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000498339.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000498339.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000498339.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	ENST00000498339.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09008013.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09008013.hg.1	ENST00000373265.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09008013.hg.1	ENST00000480353.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09008013.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09008013.hg.1	TC09000671.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09008010.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09008010.hg.1	ENST00000373265.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09008010.hg.1	ENST00000480353.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09008010.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09008010.hg.1	TC09000671.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09008009.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09008009.hg.1	ENST00000373265.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09008009.hg.1	ENST00000480353.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09008009.hg.1	NM_001261.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09008009.hg.1	TC09000671.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000491521.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000491521.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000491521.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000491521.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000498339.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000498339.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000498339.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	ENST00000498339.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	TC0900012175.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900184729.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184729.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184729.hg.1	ENST00000491521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184729.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900184729.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184729.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184729.hg.1	ENST00000491521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184729.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900184729.hg.1	TC0900012175.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900184726.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184726.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184726.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900184726.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184726.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184726.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900184726.hg.1	TC0900012175.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900184725.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184725.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184725.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900184725.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184725.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184725.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900184725.hg.1	TC0900012175.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900184727.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184727.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184727.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900184727.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184727.hg.1	ENST00000480353.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184727.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900184727.hg.1	TC0900012175.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900184723.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184723.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900184723.hg.1	ENST00000373264.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0900184723.hg.1	NM_001261.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900184723.hg.1	TC0900012175.hg.1	Clariom D TC

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Catalog #	4351372
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Genomic Map