NKX2-1
Genomic Map
Back To TopAssay Details
| Gene Symbol: NKX2-1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001079668.2 | NP_001073136.1 | 2 - 3 | 559 | 72 | |
| NM_003317.3 | NP_003308.1 | 1 - 2 | 714 | 72 | ||
| GenBank mRNA | BC006221.2 | - | 2 - 3 | 493 | 3941576 | 72 |
| BE796718.1 | - | 2 - 3 | 474 | 72 | ||
| BT009773.1 | - | 2 - 3 | 463 | 72 | ||
| D50740.1 | - | 3 - 4 | 617 | 72 | ||
| U19756.1 | - | 1 - 2 | 373 | 72 | ||
| U33749.1 | - | 1 - 2 | 714 | 72 | ||
| U43203.1 | - | 2 - 3 | 545 | 72 | ||
| X82850.1 | - | 1 - 2 | 387 | 72 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1400010734.hg.1This assay targets the same location as HTA transcript cluster(s) TC14002321.hg.1
Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Mammalian Gene Collection
Recommended Assay
Homo sapiens
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription from RNA polymerase II promoter
neuron migration
regulation of blood volume by renin-angiotensin
transcription, DNA-templated
phospholipid metabolic process
axon guidance
brain development
endoderm development
locomotory behavior
feeding behavior
response to hormone
positive regulation of gene expression
negative regulation of epithelial to mesenchymal transition
globus pallidus development
hippocampus development
cerebral cortex cell migration
forebrain dorsal/ventral pattern formation
forebrain neuron fate commitment
cerebral cortex GABAergic interneuron differentiation
pituitary gland development
lung development
negative regulation of cell migration
negative regulation of transforming growth factor beta receptor signaling pathway
thyroid gland development
forebrain development
developmental induction
response to lipopolysaccharide
Leydig cell differentiation
hyperosmotic salinity response
positive regulation of circadian rhythm
response to ethanol
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
development of primary female sexual characteristics
rhythmic process
anatomical structure formation involved in morphogenesis
oligodendrocyte differentiation
lung saccule development
epithelial tube branching involved in lung morphogenesis
Clara cell differentiation
Type II pneumocyte differentiation
RNA polymerase II regulatory region sequence-specific DNA binding
RNA polymerase II regulatory region DNA binding
core promoter binding
intronic transcription regulatory region sequence-specific DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding
enzyme binding
transcription regulatory region DNA binding
intronic transcription regulatory region DNA binding
negative regulation of transcription from RNA polymerase II promoter
neuron migration
regulation of blood volume by renin-angiotensin
transcription, DNA-templated
phospholipid metabolic process
axon guidance
brain development
endoderm development
locomotory behavior
feeding behavior
response to hormone
positive regulation of gene expression
negative regulation of epithelial to mesenchymal transition
globus pallidus development
hippocampus development
cerebral cortex cell migration
forebrain dorsal/ventral pattern formation
forebrain neuron fate commitment
cerebral cortex GABAergic interneuron differentiation
pituitary gland development
lung development
negative regulation of cell migration
negative regulation of transforming growth factor beta receptor signaling pathway
thyroid gland development
forebrain development
developmental induction
response to lipopolysaccharide
Leydig cell differentiation
hyperosmotic salinity response
positive regulation of circadian rhythm
response to ethanol
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
development of primary female sexual characteristics
rhythmic process
anatomical structure formation involved in morphogenesis
oligodendrocyte differentiation
lung saccule development
epithelial tube branching involved in lung morphogenesis
Clara cell differentiation
Type II pneumocyte differentiation
RNA polymerase II regulatory region sequence-specific DNA binding
RNA polymerase II regulatory region DNA binding
core promoter binding
intronic transcription regulatory region sequence-specific DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding
enzyme binding
transcription regulatory region DNA binding
intronic transcription regulatory region DNA binding
MicroArray Probes:
Affymetrix
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000518149.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000518149.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000518149.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000518149.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000518149.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000518149.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011990.hg.1 | ENST00000498187.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011990.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011990.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011990.hg.1 | TC14002321.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011989.hg.1 | ENST00000498187.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011989.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011989.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011989.hg.1 | TC14002321.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011988.hg.1 | ENST00000498187.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011988.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011988.hg.1 | TC14002321.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011991.hg.1 | ENST00000498187.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011991.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR14011991.hg.1 | TC14002321.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR1400182190.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182190.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182190.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1400182190.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182190.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182190.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1400182190.hg.1 | TC1400010734.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000354822.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000518149.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000518149.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000518149.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000518149.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000518149.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000518149.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_001079668.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1400010734.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1400182189.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182189.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1400182189.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182189.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1400182189.hg.1 | TC1400010734.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1400182192.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182192.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1400182192.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182192.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1400182192.hg.1 | TC1400010734.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1400182191.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182191.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182191.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182191.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1400182191.hg.1 | ENST00000498187.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182191.hg.1 | ENST00000522719.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182191.hg.1 | ENST00000546983.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1400182191.hg.1 | NM_003317.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1400182191.hg.1 | TC1400010734.hg.1 | Clariom D TC |
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