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See other XRN1 GE Assays ›
Gene Symbol:
XRN1
Gene Name:
5'-3' exoribonuclease 1
Gene Aliases:
SEP1
Chromosome Location:
Chr.3: 142306607 - 142448062 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs00949475_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: XRN1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001282857.1 NP_001269786.1 15 - 16 1831 68
NM_019001.4 NP_061874.3 15 - 16 1831 68
XM_006713673.2 XP_006713736.1 15 - 16 1831 68
XM_011512919.2 XP_011511221.1 15 - 16 1831 68
XM_011512920.2 XP_011511222.1 15 - 16 1831 68
XM_011512922.2 XP_011511224.1 12 - 13 1462 68
XM_017006640.1 XP_016862129.1 15 - 16 1831 68
XM_017006641.1 XP_016862130.1 15 - 16 1831 68
XM_017006642.1 XP_016862131.1 15 - 16 1831 68
GenBank mRNA AK123897.1 - 12 - 13 1304 68
AY137776.1 - 15 - 16 1713 68
BC078146.1 - 15 - 16 1743 68
BX640905.1 - 15 - 16 1780 68
CR627396.1 - 15 - 16 1783 68
CR749518.1 - 15 - 16 1761 68

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300012665.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03001851.hg.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene XRN1

Panther Classification:

Molecular Function -

exoribonuclease

Gene Ontology Categories:

Function(s) Process(es)

nuclear-transcribed mRNA catabolic process
rRNA catabolic process
regulation of mRNA stability
nuclear mRNA surveillance
histone mRNA catabolic process
nucleic acid phosphodiester bond hydrolysis
DNA binding
exonuclease activity
protein binding
poly(A) RNA binding

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