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See other APOBEC1 GE Assays ›
Gene Symbol:
APOBEC1
Gene Name:
apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Aliases:
APOBEC-1, BEDP, CDAR1, HEPR
Chromosome Location:
Chr.12: 7649400 - 7670599 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs00929486_m1
Size
Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: APOBEC1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001304566.1 NP_001291495.1 3 - 4 90
NM_001644.4 NP_001635.2 3 - 4 90
NM_005889.3 NP_005880.2 2 - 3 90
GenBank mRNA AI380263.1 - 2 - 3 430 90
AI862416.1 - 2 - 3 438 90
BC096158.1 - 3 - 4 90
BC096160.1 - 2 - 3 90
BC096161.1 - 2 - 3 90
BC101404.1 - 2 - 3 90
BC101405.1 - 2 - 3 90
BC101972.1 - 3 - 4 90
BC101973.1 - 3 - 4 90
BC144708.1 - 2 - 3 90
L25877.1 - 3 - 4 90
L26234.1 - 3 - 4 90
U72891.1 - 3 - 4 90

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200009789.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12001163.hg.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene APOBEC1

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Function(s) Process(es)

RNA processing
mRNA processing
lipid metabolic process
response to osmotic stress
cytidine deamination
response to zinc ion
response to gamma radiation
cytidine to uridine editing
mRNA modification
cellular response to insulin stimulus
regulation of cell proliferation
lipoprotein biosynthetic process
response to drug
lipoprotein transport
positive regulation of catalytic activity
response to ethanol
mRNA stabilization
response to calcium ion
defense response to virus
DNA cytosine deamination
DNA demethylation
negative regulation of methylation-dependent chromatin silencing
positive regulation of mRNA modification
RNA binding
mRNA binding
cytidine deaminase activity
cytosine deaminase activity
protein binding
enzyme activator activity
zinc ion binding
AU-rich element binding
protein domain specific binding
ribonucleoprotein complex binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR12015484.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR12015484.hg.1 NM_001644.4 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR12015484.hg.1 TC12001163.hg.1 HTA TC
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 ENST00000467171.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 ENST00000467171.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 ENST00000467171.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 ENST00000467171.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_001304566.1 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_001304566.1 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_001304566.1 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_001304566.1 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_001304566.1 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_001644.4 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_001644.4 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_001644.4 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_001644.4 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_001644.4 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_005889.3 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_005889.3 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_005889.3 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200009789.hg.1 NM_005889.3 Refseq
Affymetrix Human Clariom D Assay PSR1200173544.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Clariom D Assay PSR1200173544.hg.1 ENST00000467171.2 Ensembl
Affymetrix Human Clariom D Assay PSR1200173544.hg.1 NM_001304566.1 Refseq
Affymetrix Human Clariom D Assay PSR1200173544.hg.1 NM_001644.4 Refseq
Affymetrix Human Clariom D Assay PSR1200173544.hg.1 NM_005889.3 Refseq
Affymetrix Human Clariom D Assay PSR1200173544.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Clariom D Assay PSR1200173544.hg.1 ENST00000467171.2 Ensembl
Affymetrix Human Clariom D Assay PSR1200173544.hg.1 NM_001304566.1 Refseq
Affymetrix Human Clariom D Assay PSR1200173544.hg.1 NM_001644.4 Refseq
Affymetrix Human Clariom D Assay PSR1200173544.hg.1 NM_005889.3 Refseq
Affymetrix Human Clariom D Assay PSR1200173544.hg.1 TC1200009789.hg.1 Clariom D TC
Affymetrix Human Clariom D Assay TC1200009789.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Clariom D Assay TC1200009789.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Clariom D Assay TC1200009789.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Clariom D Assay TC1200009789.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Clariom D Assay TC1200009789.hg.1 ENST00000229304.4 Ensembl
Affymetrix Human Clariom D Assay TC1200009789.hg.1 ENST00000467171.2 Ensembl
Affymetrix Human Clariom D Assay TC1200009789.hg.1 ENST00000467171.2 Ensembl
Affymetrix Human Clariom D Assay TC1200009789.hg.1 ENST00000467171.2 Ensembl
Affymetrix Human Clariom D Assay TC1200009789.hg.1 ENST00000467171.2 Ensembl
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_001304566.1 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_001304566.1 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_001304566.1 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_001304566.1 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_001304566.1 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_001644.4 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_001644.4 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_001644.4 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_001644.4 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_001644.4 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_005889.3 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_005889.3 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_005889.3 Refseq
Affymetrix Human Clariom D Assay TC1200009789.hg.1 NM_005889.3 Refseq

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