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See other SEC16A GE Assays ›
Gene Symbol:
SEC16A
Gene Name:
SEC16 homolog A, endoplasmic reticulum export factor
Gene Aliases:
KIAA0310, SEC16L, p250
Chromosome Location:
Chr.9: 136440096 - 136484552 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs00927710_g1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: SEC16A
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001276418.1 NP_001263347.1 9 - 10 4827 86
NM_014866.1 NP_055681.1 10 - 11 4817 86
XM_005266134.2 XP_005266191.1 9 - 10 4680 86
XM_011519246.2 XP_011517548.1 10 - 11 4826 86
XM_011519247.1 XP_011517549.1 9 - 10 4683 86
XM_011519248.2 XP_011517550.1 9 - 10 4657 86
XM_011519249.1 XP_011517551.1 9 - 10 4680 86
XM_011519250.2 XP_011517552.1 9 - 10 4680 86
XM_011519251.1 XP_011517553.1 9 - 10 4680 86
XM_011519252.2 XP_011517554.1 9 - 10 4680 86
XM_011519253.1 XP_011517555.1 9 - 10 4680 86
XM_011519254.1 XP_011517556.1 9 - 10 4680 86
XM_011519255.2 XP_011517557.1 9 - 10 4680 86
XM_011519256.1 XP_011517558.1 9 - 10 4680 86
XM_011519257.1 XP_011517559.1 9 - 10 4680 86
XM_011519258.1 XP_011517560.1 9 - 10 4680 86
XM_011519259.1 XP_011517561.1 9 - 10 4680 86
XM_011519260.2 XP_011517562.1 9 - 10 4664 86
XM_011519262.1 XP_011517564.1 10 - 11 3969 86
XM_011519263.2 XP_011517565.1 10 - 11 3969 86
XM_011519264.2 XP_011517566.1 9 - 10 4680 86
XM_017015363.1 XP_016870852.1 9 - 10 4680 86
GenBank mRNA AB002308.4 - 10 - 11 4817 86
AB593115.1 - 9 - 10 4827 86
BC028183.1 - 5 - 6 684 86
BC125018.1 - 8 - 9 3389 86
BC125019.1 - 9 - 10 2678 86
DQ903855.1 - 8 - 9 3974 86

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900011980.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001732.hg.1

Set Membership:

Amplicon length between 86 and 100 Mammalian Gene Collection Detect Genomic DNA Homo sapiens Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

endoplasmic reticulum organization
protein transport
substantia nigra development
COPII vesicle coating
protein binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR09022226.hg.1 ENST00000290037.6 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR09022226.hg.1 ENST00000313050.7 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR09022226.hg.1 ENST00000371706.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR09022226.hg.1 ENST00000404925.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR09022226.hg.1 ENST00000431893.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR09022226.hg.1 NM_014866.1 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR09022226.hg.1 TC09001732.hg.1 HTA TC
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 ENST00000290037.10 Ensembl
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 ENST00000313050.11 Ensembl
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 ENST00000371706.7 Ensembl
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 ENST00000431893.3 Ensembl
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 ENST00000453963.5 Ensembl
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 NM_001276418.1 Refseq
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 NM_014866.1 Refseq
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 ENST00000290037.10 Ensembl
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 ENST00000313050.11 Ensembl
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 ENST00000371706.7 Ensembl
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 ENST00000431893.3 Ensembl
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 ENST00000453963.5 Ensembl
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 NM_001276418.1 Refseq
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 NM_014866.1 Refseq
Affymetrix Human Clariom D Assay PSR0900182103.hg.1 TC0900011980.hg.1 Clariom D TC

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