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See other KALRN GE Assays ›
Gene Symbol:
KALRN
Gene Name:
kalirin, RhoGEF kinase
Gene Aliases:
ARHGEF24, CHD5, CHDS5, DUET, DUO, HAPIP, TRAD
Chromosome Location:
Chr.3: 124033341 - 124726325 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs00610199_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: KALRN
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001024660.4 NP_001019831.2 31 - 32 4841 64
NM_001322988.1 NP_001309917.1 31 - 32 4841 64
NM_001322989.1 NP_001309918.1 31 - 32 4814 64
NM_001322990.1 NP_001309919.1 31 - 32 4802 64
NM_001322991.1 NP_001309920.1 31 - 32 4775 64
NM_001322992.1 NP_001309921.1 30 - 31 4691 64
NM_003947.5 NP_003938.1 31 - 32 4841 64
XM_006713810.3 XP_006713873.1 31 - 32 5086 64
XM_006713811.3 XP_006713874.1 31 - 32 5059 64
XM_006713812.3 XP_006713875.1 31 - 32 5047 64
XM_006713813.3 XP_006713876.1 31 - 32 5020 64
XM_006713814.3 XP_006713877.1 31 - 32 5086 64
XM_006713815.3 XP_006713878.1 31 - 32 5089 64
XM_011513279.2 XP_011511581.1 31 - 32 5086 64
XM_011513280.2 XP_011511582.1 31 - 32 5087 64
XM_011513281.2 XP_011511583.1 31 - 32 27708 64
XM_011513283.2 XP_011511585.1 31 - 32 5083 64
XM_011513285.2 XP_011511587.1 31 - 32 5082 64
XM_017007429.1 XP_016862918.1 31 - 32 5086 64
XM_017007430.1 XP_016862919.1 31 - 32 5086 64
XM_017007431.1 XP_016862920.1 31 - 32 5082 64
XM_017007432.1 XP_016862921.1 31 - 32 5082 64
XM_017007433.1 XP_016862922.1 31 - 32 5062 64
XM_017007434.1 XP_016862923.1 31 - 32 5050 64
XM_017007435.1 XP_016862924.1 31 - 32 5023 64
GenBank mRNA AK314126.1 - 31 - 32 4814 64
U94190.1 - 31 - 32 4784 64

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300008594.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03000642.hg.1

Set Membership:

Amplicon length less than or equal to 70 Homo sapiens Probe spans exons

Panther Classification:

Molecular Function -

guanyl-nucleotide exchange factor

Gene Ontology Categories:

Function(s) Process(es)

protein phosphorylation
signal transduction
nervous system development
vesicle-mediated transport
regulation of Rho protein signal transduction
intracellular signal transduction
positive regulation of apoptotic process
positive regulation of GTPase activity
ephrin receptor signaling pathway
regulation of small GTPase mediated signal transduction
protein serine/threonine kinase activity
guanyl-nucleotide exchange factor activity
Rho guanyl-nucleotide exchange factor activity
GTPase activator activity
ATP binding
metal ion binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR03011630.hg.1 ENST00000240874.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03011630.hg.1 ENST00000360013.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03011630.hg.1 ENST00000460856.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03011630.hg.1 NM_001024660.4 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR03011630.hg.1 NM_003947.5 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR03011630.hg.1 TC03000642.hg.1 HTA TC
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 ENST00000240874.7 Ensembl
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 ENST00000354186.8 Ensembl
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 ENST00000360013.7 Ensembl
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 ENST00000460856.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 NM_001024660.4 Refseq
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 NM_003947.5 Refseq
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 ENST00000240874.7 Ensembl
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 ENST00000354186.8 Ensembl
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 ENST00000360013.7 Ensembl
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 ENST00000460856.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 NM_001024660.4 Refseq
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 NM_003947.5 Refseq
Affymetrix Human Clariom D Assay PSR0300161233.hg.1 TC0300008594.hg.1 Clariom D TC

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