Assay Details

Gene Symbol: SEC16A
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001276418.1	NP_001263347.1	25 - 26	6878		124
	NM_014866.1	NP_055681.1	26 - 27	6868		124
	XM_005266134.2	XP_005266191.1	25 - 26	6731		124
	XM_011519246.2	XP_011517548.1	26 - 27	6877		124
	XM_011519247.1	XP_011517549.1	25 - 26	6734		124
	XM_011519248.2	XP_011517550.1	25 - 26	6708		124
	XM_011519249.1	XP_011517551.1	25 - 26	6731		124
	XM_011519250.2	XP_011517552.1	25 - 26	6731		124
	XM_011519251.1	XP_011517553.1	25 - 26	6731		124
	XM_011519252.2	XP_011517554.1	25 - 26	6731		124
	XM_011519253.1	XP_011517555.1	25 - 26	6731		124
	XM_011519254.1	XP_011517556.1	25 - 26	6731		124
	XM_011519255.2	XP_011517557.1	25 - 26	6731		124
	XM_011519256.1	XP_011517558.1	25 - 26	6731		124
	XM_011519257.1	XP_011517559.1	25 - 26	6731		124
	XM_011519258.1	XP_011517560.1	24 - 25	6590		124
	XM_011519259.1	XP_011517561.1	25 - 26	6731		124
	XM_011519260.2	XP_011517562.1	25 - 26	6715		124
	XM_011519261.1	XP_011517563.1	22 - 23	6284		124
	XM_011519262.1	XP_011517564.1	26 - 27	6020		124
	XM_011519263.2	XP_011517565.1	26 - 27	6020		124
	XM_017015363.1	XP_016870852.1	25 - 26	6731		124
GenBank mRNA	AB002308.4	-	26 - 27	6868		124
	AB593115.1	-	25 - 26	6878		124
	AK074565.1	-	1 - 2	93		124
	AK094756.1	-	4 - 5	840		124
	AK301371.1	-	3 - 4	198		124
	AK302210.1	-	2 - 3	134		124
	AK316194.1	-	1 - 2	93		124
	BC001404.2	-	9 - 10	947		124
	BC008332.1	-	15 - 16	1741		124
	BC028183.1	-	21 - 22	2735		124
	BC098454.1	-	9 - 10	1031		124
	BC125018.1	-	24 - 25	5440		124
	BC125019.1	-	25 - 26	4729		124
	DQ903855.1	-	24 - 25	6025		124

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900011980.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001732.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK074565.1,AK301371.1,AK302210.1,AK316194.1 transcripts.

Set Membership:

Amplicon length greater than or equal to 101

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09022203.hg.1	ENST00000290037.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022203.hg.1	ENST00000313050.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022203.hg.1	ENST00000313084.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022203.hg.1	ENST00000371706.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022203.hg.1	ENST00000398348.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022203.hg.1	ENST00000404925.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022203.hg.1	ENST00000431893.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022203.hg.1	ENST00000537660.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022203.hg.1	NM_014866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09022203.hg.1	TC09001732.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000277537.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000290037.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000313050.11	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000313084.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000371706.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000431893.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000453963.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	NM_001276418.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	NM_014866.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000277537.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000290037.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000313050.11	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000313084.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000371706.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000431893.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	ENST00000453963.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	NM_001276418.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	NM_014866.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900182084.hg.1	TC0900011980.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900182083.hg.1	ENST00000290037.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182083.hg.1	ENST00000313084.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182083.hg.1	NM_001276418.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900182083.hg.1	ENST00000290037.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182083.hg.1	ENST00000313084.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182083.hg.1	NM_001276418.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900182083.hg.1	TC0900011980.hg.1	Clariom D TC

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Catalog #	4351372
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System Message

Genomic Map