Assay Details

Gene Symbol: HLA-DRA
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019111.4	NP_061984.2	1 - 2	191		97
GenBank mRNA	AK297032.1	-	1 - 2	154		97
	AK301190.1	-	1 - 2	146		97
	AK301354.1	-	1 - 2	149		97
	AK310161.1	-	1 - 2	120		97
	AK313123.1	-	1 - 2	146		97
	BC032350.1	-	1 - 2	122	5214156	97
	BC071659.1	-	1 - 2	130	5162925	97
	BM849755.1	-	1 - 2	192		97
	CR457013.1	-	1 - 2	82		97
	J00194.1	-	1 - 2	108		97
	J00195.1	-	1 - 2	101		97
	J00197.1	-	1 - 2	110		97
	K01171.1	-	1 - 2	96		97
	M35979.1	-	1 - 2	89		97
	M60333.1	-	1 - 2	109		97
	M60334.1	-	1 - 2	109		97

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600007650.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000399.hg.1, TC6_cox_hap2000090.hg.1, TC6_dbb_hap3000083.hg.1, TC6_mann_hap4000074.hg.1, TC6_mcf_hap5000075.hg.1, TC6_qbl_hap6000081.hg.1, TC6_ssto_hap7000076.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

Mammalian Gene Collection

Recommended Assay

Homo sapiens

Human Immune Response

Human T-Cell Receptor and CD3 Complex

Human Antigen Processing and Presantation by MHCS

Human Cell Surface Markers

HUMAN IL-4 PATHWAY

HUMAN PATHOGENESIS OF RHEUMATOID ARTHRITIS

1700

Inventoried

Human_T-Cell_Receptor_and_CD3_Complex

Human_Immune

Human_Cell_Surface_Markers

Human_Antigen_Processing_and_Presentation_by_MHCS

Human_Pathogenesis_of_Rheumatoid_Arthritis

Human_IL-4_Pathway

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene HLA-DRA

Panther Classification:

Molecular Function -

major histocompatibility complex protein

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001724.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001724.hg.1	TC6_dbb_hap3000083.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001499.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001499.hg.1	TC6_mcf_hap5000075.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001690.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001690.hg.1	TC6_qbl_hap6000081.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001554.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001554.hg.1	TC6_ssto_hap7000076.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001723.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001723.hg.1	TC6_dbb_hap3000083.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001320.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001320.hg.1	TC6_mann_hap4000074.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001494.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001494.hg.1	TC6_mcf_hap5000075.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001686.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001686.hg.1	TC6_qbl_hap6000081.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001724.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001724.hg.1	TC6_cox_hap2000090.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001549.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001549.hg.1	TC6_ssto_hap7000076.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001550.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001550.hg.1	TC6_ssto_hap7000076.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001720.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001720.hg.1	TC6_dbb_hap3000083.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001689.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001689.hg.1	TC6_qbl_hap6000081.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001728.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001728.hg.1	TC6_cox_hap2000090.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001719.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001719.hg.1	TC6_dbb_hap3000083.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001495.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001495.hg.1	TC6_mcf_hap5000075.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001553.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001553.hg.1	TC6_ssto_hap7000076.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06004626.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004626.hg.1	ENST00000395388.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004626.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004626.hg.1	TC06000399.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001729.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001729.hg.1	TC6_cox_hap2000090.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001317.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001317.hg.1	TC6_mann_hap4000074.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001321.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001321.hg.1	TC6_mann_hap4000074.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001498.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001498.hg.1	TC6_mcf_hap5000075.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001685.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001685.hg.1	TC6_qbl_hap6000081.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06004620.hg.1	ENST00000395388.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004620.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004620.hg.1	TC06000399.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001725.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001725.hg.1	TC6_cox_hap2000090.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06004625.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004625.hg.1	ENST00000395388.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004625.hg.1	ENST00000462200.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004625.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004625.hg.1	TC06000399.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001316.hg.1	NM_019111.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001316.hg.1	TC6_mann_hap4000074.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0600152820.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152820.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600152820.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152820.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600152820.hg.1	TC0600007650.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600152823.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152823.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152823.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600152823.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152823.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152823.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600152823.hg.1	TC0600007650.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	TC0600007650.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600152824.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152824.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152824.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600152824.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152824.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152824.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600152824.hg.1	TC0600007650.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600152821.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152821.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152821.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600152821.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152821.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152821.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600152821.hg.1	TC0600007650.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600152825.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152825.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152825.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600152825.hg.1	ENST00000374982.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152825.hg.1	ENST00000395388.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152825.hg.1	NM_019111.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600152825.hg.1	TC0600007650.hg.1	Clariom D TC

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Catalog #	4331182
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Genomic Map