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See other CNOT1 GE Assays ›
Gene Symbol:
CNOT1
Gene Name:
CCR4-NOT transcription complex subunit 1
Gene Aliases:
AD-005, CDC39, NOT1, NOT1H
Chromosome Location:
Chr.16: 58519946 - 58629886 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs00212429_m1
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: CNOT1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001265612.1 NP_001252541.1 46 - 47 7099 143
NM_016284.4 NP_057368.3 46 - 47 7114 143
NR_049763.1 47 - 48 7282 143
GenBank mRNA AB023224.2 - 33 - 34 5159 143
AF110778.1 - 6 - 7 891 142
AK056927.1 - 23 - 24 3444 143
AK075125.1 - 16 - 17 2413 143
AK092885.1 - 6 - 7 1658 143
AK301092.1 - 6 - 7 878 143
AK302495.1 - 23 - 24 3484 143
AL117492.1 - 18 - 19 2953 143
AL833549.1 - 46 - 47 7073 143
BC000779.2 - 8 - 9 1272 143
BC024317.1 - 29 - 30 4513 143
BC027969.2 - 5 - 6 728 143
BX537840.1 - 47 - 48 7228 143
EF553522.1 - 46 - 47 7048 143

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1600010490.hg.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Homo sapiens Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CNOT1

Panther Classification:

Molecular Function -

mRNA polyadenylation factor

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
nuclear-transcribed mRNA poly(A) tail shortening
transcription, DNA-templated
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
multicellular organism development
positive regulation of cytoplasmic mRNA processing body assembly
negative regulation of translation
negative regulation of intracellular estrogen receptor signaling pathway
gene silencing by miRNA
negative regulation of retinoic acid receptor signaling pathway
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
positive regulation of mRNA catabolic process
RNA phosphodiester bond hydrolysis, exonucleolytic
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
regulation of stem cell population maintenance
poly(A)-specific ribonuclease activity
protein binding
protein domain specific binding
estrogen receptor binding
protein complex scaffold
retinoic acid receptor binding
poly(A) RNA binding
armadillo repeat domain binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 ENST00000245138.8 Ensembl
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 ENST00000317147.9 Ensembl
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 ENST00000563130.5 Ensembl
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 ENST00000567188.5 Ensembl
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 ENST00000569240.5 Ensembl
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 ENST00000569924.1 Ensembl
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 NM_001265612.1 Refseq
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 NM_016284.4 Refseq
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 NR_049763.1 Refseq
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 ENST00000245138.8 Ensembl
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 ENST00000317147.9 Ensembl
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 ENST00000563130.5 Ensembl
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 ENST00000567188.5 Ensembl
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 ENST00000569240.5 Ensembl
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 ENST00000569924.1 Ensembl
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 NM_001265612.1 Refseq
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 NM_016284.4 Refseq
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 NR_049763.1 Refseq
Affymetrix Human Clariom D Assay PSR1600180625.hg.1 TC1600010490.hg.1 Clariom D TC

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