Assay Details

Gene Symbol: TIMP3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000362.4	NP_000353.1	1 - 2	1309		59
GenBank mRNA	AK298126.1	-	2 - 3	129		59
	AK314871.1	-	1 - 2	418		59
	BC014277.2	-	1 - 2	366	3689386	59
	BT006848.1	-	1 - 2	123		59
	CR456593.1	-	1 - 2	171		59
	L15078.1	-	1 - 2	81		59
	S78453.1	-	1 - 2	399		59
	U02571.1	-	1 - 2	404		59
	U14394.1	-	1 - 2	410		59
	U67195.1	-	1 - 2	401		59
	X76227.1	-	1 - 2	193		59

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2200007150.hg.1
This assay targets the same location as HTA transcript cluster(s) TC22000248.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK298126.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

Immune Tolerance Network

Mammalian Gene Collection

Recommended Assay

Homo sapiens

Human Extracellular Matrix and Adhesion Molecules

Human Angiogenesis

HUMAN P53 MEDIATED APOPTOSIS

Inventoried

Human_Angiogenesis

Human_p53_Mediated_Apoptosis

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TIMP3

Panther Classification:

Molecular Function -

protease inhibitor

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR22004653.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004653.hg.1	ENST00000382049.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004653.hg.1	ENST00000538671.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004653.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22004653.hg.1	TC22000248.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22004654.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004654.hg.1	ENST00000382049.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004654.hg.1	ENST00000538671.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004654.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22004654.hg.1	TC22000248.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22004650.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004650.hg.1	ENST00000382049.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004650.hg.1	ENST00000538671.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004650.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22004650.hg.1	TC22000248.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22004647.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22004647.hg.1	TC22000248.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22004651.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004651.hg.1	ENST00000382049.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004651.hg.1	ENST00000538671.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004651.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22004651.hg.1	TC22000248.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22004652.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004652.hg.1	ENST00000382049.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004652.hg.1	NM_000362.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22004652.hg.1	TC22000248.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR2200150343.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2200150343.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200150343.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2200150343.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200150343.hg.1	TC2200007150.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200150341.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200150341.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200150341.hg.1	TC2200007150.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200150342.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2200150342.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200150342.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2200150342.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200150342.hg.1	TC2200007150.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200150344.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2200150344.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200150344.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2200150344.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200150344.hg.1	TC2200007150.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200150348.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2200150348.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200150348.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2200150348.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200150348.hg.1	TC2200007150.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	ENST00000266085.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	NM_000362.4	Refseq
Affymetrix Human Clariom D Assay	TC2200007150.hg.1	NM_000362.4	Refseq

Citations (1)

Systematic analysis of transcribed loci in ENCODE regions using RACE sequencing reveals extensive transcription in the human genome.

Authors: Wu JQ, Du J, Rozowsky J, Zhang Z, Urban AE, Euskirchen G, Weissman S, Gerstein M, Snyder M
Journal: Genome Biol - Page No R3 (Tue Jan 01 00:00:00 UTC 2008)
Volume (Year): 9 (2008)
Product Usage: -

Availability	Inventoried
Catalog #	4331182
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System Message

Genomic Map