COL1A1
Genomic MapAssay Details
| Gene Symbol: COL1A1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_000088.3 | NP_000079.2 | 1 - 2 | 230 | 66 | |
| XM_005257058.3 | XP_005257115.2 | 1 - 2 | 239 | 66 | ||
| XM_005257059.4 | XP_005257116.2 | 1 - 2 | 239 | 66 | ||
| XM_011524341.1 | XP_011522643.1 | 1 - 2 | 239 | 66 | ||
| GenBank mRNA | AB209597.1 | - | 1 - 2 | 205 | 66 | |
| BC036531.2 | - | 1 - 2 | 220 | 5264710 | 66 | |
| JQ236861.1 | - | 1 - 2 | 104 | 66 | ||
| M36546.1 | - | 1 - 2 | 187 | 66 | ||
| X07884.1 | - | 1 - 2 | 187 | 66 | ||
| Z74615.1 | - | 1 - 2 | 223 | 66 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1700011088.hg.1This assay targets the same location as HTA transcript cluster(s) TC17001682.hg.1
Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
Mammalian Gene Collection
Recommended Assay
Homo sapiens
Human MAP Kinase Pathways
Human Osteogenesis
Human Stem Cell Pluripotency
Human Extracellular Matrix and Adhesion Molecules
Human Cell Surface Markers
HUMAN MOLECULAR MECHANISMS OF CANCER
HUMAN ILK SIGNALING
1700
Inventoried
MicroArray Quality Control (MAQC)
Human_Osteogenesis
Human_Map_Kinase
Human_Cell_Surface_Markers
Human_Stem_Cell
Human_ILK_Signaling
Human_Molecular_Mechanisms_of_Cancer
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
MicroArray Probes:
Back To TopCitations (56)
Gene profiling of scleroderma skin reveals robust signatures of disease that are imperfectly reflected in the transcript profiles of explanted fibroblasts.
- Authors
- Gardner H, Shearstone JR, Bandaru R, Crowell T, Lynes M, Trojanowska M, Pannu J, Smith E, Jablonska S, Blaszczyk M, Tan FK, Mayes MD
- Journal
- Arthritis Rheum - Page No 1961 (Thu Jun 01 00:00:00 UTC 2006)
- Volume (Year)
- 54 (2006)
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- -
Osteogenic differentiation of human umbilical cord mesenchymal stromal cells in polyglycolic acid scaffolds.
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- Wang L, Dormer NH, Bonewald LF, Detamore MS
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- Tissue Eng Part A - Page No 1937 (Tue Jun 01 00:00:00 UTC 2010)
- Volume (Year)
- 16 (2010)
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- -
MCP-1/CCR2-dependent loop for fibrogenesis in human peripheral CD14-positive monocytes.
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- Sakai N, Wada T, Furuichi K, Shimizu K, Kokubo S, Hara A, Yamahana J, Okumura T, Matsushima K, Yokoyama H, Kaneko S
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- J Leukoc Biol - Page No 555 (Wed Mar 01 00:00:00 UTC 2006)
- Volume (Year)
- 79 (2006)
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Effects of synovial fluid from aseptic prosthesis loosening on collagen production in osteoblasts.
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- Tsai JA, Andersson MK, Ivarsson M, Granberg B, Stark A
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- Int Orthop - Page No 873 (Mon Jun 01 00:00:00 UTC 2009)
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- 33 (2009)
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Potent induction of chondrocytic differentiation of human adipose-derived adult stem cells by bone morphogenetic protein 6.
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- Estes BT, Wu AW, Guilak F
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- Arthritis Rheum - Page No 1222 (Sat Apr 01 00:00:00 UTC 2006)
- Volume (Year)
- 54 (2006)
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Intervention in growth factor activated signaling pathways by renally targeted kinase inhibitors.
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- Fretz MM, Dolman ME, Lacombe M, Prakash J, Nguyen TQ, Goldschmeding R, Pato J, Storm G, Hennink WE, Kok RJ
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- J Control Release - Page No 200 (Thu Dec 18 00:00:00 UTC 2008)
- Volume (Year)
- 132 (2008)
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Differentiation of human mesenchymal stem cells and articular chondrocytes: analysis of chondrogenic potential and expression pattern of differentiation-related transcription factors.
- Authors
- Karlsson C, Brantsing C, Svensson T, Brisby H, Asp J, Tallheden T, Lindahl A
- Journal
- J Orthop Res - Page No 152 (Thu Feb 01 00:00:00 UTC 2007)
- Volume (Year)
- 25 (2007)
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Association of an extracellular matrix gene cluster with breast cancer prognosis and endocrine therapy response.
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- Helleman J, Jansen MP, Ruigrok-Ritstier K, van Staveren IL, Look MP, Meijer-van Gelder ME, Sieuwerts AM, Klijn JG, Sleijfer S, Foekens JA, Berns EM
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- Clin Cancer Res - Page No 5555 (Mon Sep 01 00:00:00 UTC 2008)
- Volume (Year)
- 14 (2008)
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Circulating mesenchymal stem cells with abnormal osteogenic differentiation in patients with osteoporosis.
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- Dalle Carbonare L, Valenti MT, Zanatta M, Donatelli L, Lo Cascio V
- Journal
- Arthritis Rheum - Page No 3356 (Sun Nov 01 00:00:00 UTC 2009)
- Volume (Year)
- 60 (2009)
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- -
Fibrin gel improved the spatial uniformity and phenotype of human chondrocytes seeded on collagen scaffolds.
- Authors
- Malicev E, Radosavljevic D, Velikonja NK
- Journal
- Biotechnol Bioeng - Page No 364 (Thu Feb 01 00:00:00 UTC 2007)
- Volume (Year)
- 96 (2007)
- Product Usage
- -
Inorganic polyphosphate differentiates human mesenchymal stem cells into osteoblastic cells.
- Authors
- Morimoto D, Tomita T, Kuroda S, Higuchi C, Kato S, Shiba T, Nakagami H, Morishita R, Yoshikawa H
- Journal
- J Bone Miner Metab - Page No 418 (Thu Jul 01 00:00:00 UTC 2010)
- Volume (Year)
- 28 (2010)
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Decreased gene expression of fibrillin-1 in stress urinary incontinence.
- Authors
- Soderberg MW, Bystrom B, Hammarstrom M, Malmstrom A, Ekman-Ordeberg G
- Journal
- Neurourol Urodyn - Page No 476 (Mon Mar 01 00:00:00 UTC 2010)
- Volume (Year)
- 29 (2010)
- Product Usage
- -
Modification of silk fibroin using diazonium coupling chemistry and the effects on hMSC proliferation and differentiation.
- Authors
- Murphy AR, St John P, Kaplan DL
- Journal
- Biomaterials - Page No 2829 (Tue Jul 01 00:00:00 UTC 2008)
- Volume (Year)
- 29 (2008)
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- -
Thermogelling chitosan and collagen composite hydrogels initiated with beta-glycerophosphate for bone tissue engineering.
- Authors
- Wang L, Stegemann JP
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- Biomaterials - Page No 3976 (Sat May 01 00:00:00 UTC 2010)
- Volume (Year)
- 31 (2010)
- Product Usage
- -
Hyaluronic acid modulates gene expression of connective tissue growth factor (CTGF), transforming growth factor-beta1 (TGF-beta1), and vascular endothelial growth factor (VEGF) in human fibroblast-like synovial cells from advanced-stage osteoarthritis in vitro.
- Authors
- Lee YT, Shao HJ, Wang JH, Liu HC, Hou SM, Young TH
- Journal
- J Orthop Res - Page No 492 (Thu Apr 01 00:00:00 UTC 2010)
- Volume (Year)
- 28 (2010)
- Product Usage
- -
Multidifferentiation potential of mesenchymal stem cells in three-dimensional collagen gel cultures.
- Authors
- Yoneno K, Ohno S, Tanimoto K, Honda K, Tanaka N, Doi T, Kawata T, Tanaka E, Kapila S, Tanne K
- Journal
- J Biomed Mater Res A - Page No 733 (Thu Dec 01 00:00:00 UTC 2005)
- Volume (Year)
- 75 (2005)
- Product Usage
- -
Human Primary Articular Chondrocytes, Chondroblasts-Like Cells, and Dedifferentiated Chondrocytes: Differences in Gene, MicroRNA, and Protein Expression and Phenotype.
- Authors
- Karlsen TA, Shahdadfar A, Brinchmann JE
- Journal
- Tissue Eng Part C Methods - Page No (Thu Oct 21 00:00:00 UTC 2010)
- Volume (Year)
- (2010)
- Product Usage
- -
Inhibition of histone deacetylase activity suppresses epithelial-to-mesenchymal transition induced by TGF-beta1 in human renal epithelial cells.
- Authors
- Yoshikawa M, Hishikawa K, Marumo T, Fujita T
- Journal
- J Am Soc Nephrol - Page No 58 (Mon Jan 01 00:00:00 UTC 2007)
- Volume (Year)
- 18 (2007)
- Product Usage
- -
Effect of menopause on gene expression pattern in bone tissue of nonosteoporotic women.
- Authors
- Kosa JP, Balla B, Speer G, Kiss J, Borsy A, Podani J, Takacs I, Lazary A, Nagy Z, Bacsi K, Orosz L, Lakatos P
- Journal
- Menopause - Page No 367 (Sun Mar 01 00:00:00 UTC 2009)
- Volume (Year)
- 16 (2009)
- Product Usage
- -
Adenovirus-mediated gene transfer of hIGF-IB in mouse lungs induced prolonged inflammation but no fibroproliferation.
- Authors
- Leger C, Ni A, Andonegui G, Wong J, Mowat C, Winston BW
- Journal
- Am J Physiol Lung Cell Mol Physiol - Page No L492 (Thu Apr 01 00:00:00 UTC 2010)
- Volume (Year)
- 298 (2010)
- Product Usage
- -
Chondrogenic differentiation of human bone marrow derived mesenchymal stem cells in self-gelling alginate discs reveals novel chondrogenic signature gene clusters.
- Authors
- Herlofsen SR, Kuchler AM, Melvik JE, Brinchmann JE
- Journal
- Tissue Eng Part A - Page No (Fri Nov 19 00:00:00 UTC 2010)
- Volume (Year)
- (2010)
- Product Usage
- -
The differentiation of mesenchymal stem cells by mechanical stress or/and co-culture system.
- Authors
- Lee IC, Wang JH, Lee YT, Young TH
- Journal
- Biochem Biophys Res Commun - Page No 147 (Fri Jan 05 00:00:00 UTC 2007)
- Volume (Year)
- 352 (2007)
- Product Usage
- -
Proliferation and differentiation potential of chondrocytes from osteoarthritic patients.
- Authors
- Tallheden T, Bengtsson C, Brantsing C, Sjogren-Jansson E, Carlsson L, Peterson L, Brittberg M, Lindahl A
- Journal
- Arthritis Res Ther - Page No R560 (Sat Jan 01 00:00:00 UTC 2005)
- Volume (Year)
- 7 (2005)
- Product Usage
- -
The proliferation and differentiation of osteoblasts in co-culture with human umbilical vein endothelial cells: An improved analysis using fluorescence-activated cell sorting.
- Authors
- Zhang Y, Schedle A, Matejka M, Rausch-Fan X, Andrukhov O
- Journal
- Cell Mol Biol Lett - Page No 517 (Wed Dec 01 00:00:00 UTC 2010)
- Volume (Year)
- 15 (2010)
- Product Usage
- -
Silk fibroin/hyaluronan scaffolds for human mesenchymal stem cell culture in tissue engineering.
- Authors
- Garcia-Fuentes M, Meinel AJ, Hilbe M, Meinel L, Merkle HP
- Journal
- Biomaterials - Page No 5068 (Thu Oct 01 00:00:00 UTC 2009)
- Volume (Year)
- 30 (2009)
- Product Usage
- -
Flow perfusion culture of human mesenchymal stem cells on silicate-substituted tricalcium phosphate scaffolds.
- Authors
- Bjerre L, Bunger CE, Kassem M, Mygind T
- Journal
- Biomaterials - Page No 2616 (Sun Jun 01 00:00:00 UTC 2008)
- Volume (Year)
- 29 (2008)
- Product Usage
- -
Extracellular matrix production by adipose-derived stem cells: implications for heart valve tissue engineering.
- Authors
- Colazzo F, Sarathchandra P, Smolenski RT, Chester AH, Tseng YT, Czernuszka JT, Yacoub MH, Taylor PM
- Journal
- Biomaterials - Page No 119 (Sat Jan 01 00:00:00 UTC 2011)
- Volume (Year)
- 32 (2011)
- Product Usage
- -
Effects of chronic rosiglitazone therapy on gene expression in human adipose tissue in vivo in patients with type 2 diabetes.
- Authors
- Kolak M, Yki-Jarvinen H, Kannisto K, Tiikkainen M, Hamsten A, Eriksson P, Fisher RM
- Journal
- J Clin Endocrinol Metab - Page No 720 (Thu Feb 01 00:00:00 UTC 2007)
- Volume (Year)
- 92 (2007)
- Product Usage
- -
Mesenchymal progenitor cell markers in human articular cartilage: normal distribution and changes in osteoarthritis.
- Authors
- Grogan SP, Miyaki S, Asahara H, D'Lima DD, Lotz MK
- Journal
- Arthritis Res Ther - Page No R85 (Thu Jan 01 00:00:00 UTC 2009)
- Volume (Year)
- 11 (2009)
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- -
Monolayer cell expansion conditions affect the chondrogenic potential of adipose-derived stem cells.
- Authors
- Estes BT, Diekman BO, Guilak F
- Journal
- Biotechnol Bioeng - Page No 986 (Sat Mar 01 00:00:00 UTC 2008)
- Volume (Year)
- 99 (2008)
- Product Usage
- -
Liver X receptor is a therapeutic target for photoaging and chronological skin aging.
- Authors
- Chang KC, Shen Q, Oh IG, Jelinsky SA, Jenkins SF, Wang W, Wang Y, LaCava M, Yudt MR, Thompson CC, Freedman LP, Chung JH, Nagpal S
- Journal
- Mol Endocrinol - Page No 2407 (Sat Nov 01 00:00:00 UTC 2008)
- Volume (Year)
- 22 (2008)
- Product Usage
- -
Human serum for culture of articular chondrocytes.
- Authors
- Tallheden T, van der Lee J, Brantsing C, Mansson JE, Sjogren-Jansson E, Lindahl A
- Journal
- Cell Transplant - Page No 469 (Sat Jan 01 00:00:00 UTC 2005)
- Volume (Year)
- 14 (2005)
- Product Usage
- -
The phenotypic responses of human anterior cruciate ligament cells cultured on poly(epsilon-caprolactone) and chitosan.
- Authors
- Shao HJ, Chen CS, Lee YT, Wang JH, Young TH
- Journal
- J Biomed Mater Res A - Page No 1297 (Tue Jun 15 00:00:00 UTC 2010)
- Volume (Year)
- 93 (2010)
- Product Usage
- -
Different gene expression patterns in the bone tissue of aging postmenopausal osteoporotic and non-osteoporotic women.
- Authors
- Balla B, Kosa JP, Kiss J, Borsy A, Podani J, Takacs I, Lazary A, Nagy Z, Bacsi K, Speer G, Orosz L, Lakatos P
- Journal
- Calcif Tissue Int - Page No 12 (Tue Jan 01 00:00:00 UTC 2008)
- Volume (Year)
- 82 (2008)
- Product Usage
- -
Defining long-term maintenance conditions of human embryonic stem cells with arrayed cellular microenvironment technology.
- Authors
- Brafman DA, Shah KD, Fellner T, Chien S, Willert K
- Journal
- Stem Cells Dev - Page No 1141 (Thu Oct 01 00:00:00 UTC 2009)
- Volume (Year)
- 18 (2009)
- Product Usage
- -
First look at the effect of overexpression of TIGR/MYOC on the transcriptome of the human trabecular meshwork.
- Authors
- Borras T, Bryant PA, Chisolm SS
- Journal
- Exp Eye Res - Page No 1002 (Thu Jun 01 00:00:00 UTC 2006)
- Volume (Year)
- 82 (2006)
- Product Usage
- -
Notch and HES5 are regulated during human cartilage differentiation.
- Authors
- Karlsson C, Jonsson M, Asp J, Brantsing C, Kageyama R, Lindahl A
- Journal
- Cell Tissue Res - Page No 539 (Thu Mar 01 00:00:00 UTC 2007)
- Volume (Year)
- 327 (2007)
- Product Usage
- -
Dynamics of gene expression during bone matrix formation in osteogenic cultures derived from human embryonic stem cells in vitro.
- Authors
- Karner E, Backesjo CM, Cedervall J, Sugars RV, Ahrlund-Richter L, Wendel M
- Journal
- Biochim Biophys Acta - Page No 110 (Sun Feb 01 00:00:00 UTC 2009)
- Volume (Year)
- 1790 (2009)
- Product Usage
- -
Molecular evidence of injury and inflammation in normal and fibrotic renal allografts one year posttransplant.
- Authors
- Park W, Griffin M, Grande JP, Cosio F, Stegall MD
- Journal
- Transplantation - Page No 1466 (Fri Jun 15 00:00:00 UTC 2007)
- Volume (Year)
- 83 (2007)
- Product Usage
- -
Mechanical properties and gene expression of chondrocytes on micropatterned substrates following dedifferentiation in monolayer.
- Authors
- Darling EM, Pritchett PE, Evans BA, Superfine R, Zauscher S, Guilak F
- Journal
- Cell Mol Bioeng - Page No 395 (Sun Aug 09 00:00:00 UTC 2009)
- Volume (Year)
- 2 (2009)
- Product Usage
- -
Effects of cyclic mechanical stretching on the mRNA expression of tendon/ligament-related and osteoblast-specific genes in human mesenchymal stem cells.
- Authors
- Chen YJ, Huang CH, Lee IC, Lee YT, Chen MH, Young TH
- Journal
- Connect Tissue Res - Page No 7 (Tue Jan 01 00:00:00 UTC 2008)
- Volume (Year)
- 49 (2008)
- Product Usage
- -
The antifibrotic drug halofuginone inhibits proliferation and collagen production by human leiomyoma and myometrial smooth muscle cells.
- Authors
- Grudzien MM, Low PS, Manning PC, Arredondo M, Belton RJ Jr, Nowak RA
- Journal
- Fertil Steril - Page No 1290 (Mon Mar 01 00:00:00 UTC 2010)
- Volume (Year)
- 93 (2010)
- Product Usage
- -
Cervical tissue engineering using silk scaffolds and human cervical cells.
- Authors
- House M, Sanchez CC, Rice WL, Socrate S, Kaplan DL
- Journal
- Tissue Eng Part A - Page No 2101 (Tue Jun 01 00:00:00 UTC 2010)
- Volume (Year)
- 16 (2010)
- Product Usage
- -
Induction of matrix metalloproteinase-1 by small interfering RNA targeting connective tissue growth factor in dermal fibroblasts from patients with systemic sclerosis.
- Authors
- Ishibuchi H, Abe M, Yokoyama Y, Ishikawa O
- Journal
- Exp Dermatol - Page No e111 (Sun Aug 01 00:00:00 UTC 2010)
- Volume (Year)
- 19 (2010)
- Product Usage
- -
Mesenchymal stem cell ingrowth and differentiation on coralline hydroxyapatite scaffolds.
- Authors
- Mygind T, Stiehler M, Baatrup A, Li H, Zou X, Flyvbjerg A, Kassem M, Bunger C
- Journal
- Biomaterials - Page No 1036 (Thu Feb 01 00:00:00 UTC 2007)
- Volume (Year)
- 28 (2007)
- Product Usage
- -
Morphology, proliferation, and osteogenic differentiation of mesenchymal stem cells cultured on titanium, tantalum, and chromium surfaces.
- Authors
- Stiehler M, Lind M, Mygind T, Baatrup A, Dolatshahi-Pirouz A, Li H, Foss M, Besenbacher F, Kassem M, Bunger C
- Journal
- J Biomed Mater Res A - Page No 448 (Fri Aug 01 00:00:00 UTC 2008)
- Volume (Year)
- 86 (2008)
- Product Usage
- -
Effect of vertebroplasty filler materials on viability and gene expression of human nucleus pulposus cells.
- Authors
- Lazary A, Speer G, Varga PP, Balla B, Bacsi K, Kosa JP, Nagy Z, Takacs I, Lakatos P
- Journal
- J Orthop Res - Page No 601 (Thu May 01 00:00:00 UTC 2008)
- Volume (Year)
- 26 (2008)
- Product Usage
- -
Role of Smad2/3 and p38 MAP kinase in TGF-beta1-induced epithelial-mesenchymal transition of pulmonary epithelial cells.
- Authors
- Kolosova I, Nethery D, Kern JA
- Journal
- J Cell Physiol - Page No (Wed Oct 13 00:00:00 UTC 2010)
- Volume (Year)
- (2010)
- Product Usage
- -
Nickel induces intracellular calcium mobilization and pathophysiological responses in human cultured airway epithelial cells.
- Authors
- Cortijo J, Milara J, Mata M, Donet E, Gavara N, Peel SE, Hall IP, Morcillo EJ
- Journal
- Chem Biol Interact - Page No 25 (Tue Jan 05 00:00:00 UTC 2010)
- Volume (Year)
- 183 (2010)
- Product Usage
- -
DNA binding-dependent glucocorticoid receptor activity promotes adipogenesis via Kruppel-like factor 15 gene expression.
- Authors
- Asada M, Rauch A, Shimizu H, Maruyama H, Miyaki S, Shibamori M, Kawasome H, Ishiyama H, Tuckermann J, Asahara H
- Journal
- Lab Invest - Page No (Mon Oct 18 00:00:00 UTC 2010)
- Volume (Year)
- (2010)
- Product Usage
- -
Modulation of gene expression and collagen production of anterior cruciate ligament cells through cell shape changes on polycaprolactone/chitosan blends.
- Authors
- Shao HJ, Lee YT, Chen CS, Wang JH, Young TH
- Journal
- Biomaterials - Page No 4695 (Tue Jun 01 00:00:00 UTC 2010)
- Volume (Year)
- 31 (2010)
- Product Usage
- -
Adenoviral gene transfer of active human transforming growth factor-{beta}2 elevates intraocular pressure and reduces outflow facility in rodent eyes.
- Authors
- Shepard AR, Millar JC, Pang IH, Jacobson N, Wang WH, Clark AF
- Journal
- Invest Ophthalmol Vis Sci - Page No 2067 (Thu Apr 01 00:00:00 UTC 2010)
- Volume (Year)
- 51 (2010)
- Product Usage
- -
Effect of dynamic 3-D culture on proliferation, distribution, and osteogenic differentiation of human mesenchymal stem cells.
- Authors
- Stiehler M, Bunger C, Baatrup A, Lind M, Kassem M, Mygind T
- Journal
- J Biomed Mater Res A - Page No 96 (Wed Apr 01 00:00:00 UTC 2009)
- Volume (Year)
- 89 (2009)
- Product Usage
- -
MicroRNA-140 is expressed in differentiated human articular chondrocytes and modulates interleukin-1 responses.
- Authors
- Miyaki S, Nakasa T, Otsuki S, Grogan SP, Higashiyama R, Inoue A, Kato Y, Sato T, Lotz MK, Asahara H
- Journal
- Arthritis Rheum - Page No 2723 (Tue Sep 01 00:00:00 UTC 2009)
- Volume (Year)
- 60 (2009)
- Product Usage
- -
DNA methylation analysis as novel tool for quality control in regenerative medicine.
- Authors
- Rapko S, Baron U, Hoffmuller U, Model F, Wolfe L, Olek S
- Journal
- Tissue Eng - Page No 2271 (Sat Sep 01 00:00:00 UTC 2007)
- Volume (Year)
- 13 (2007)
- Product Usage
- -
Human adipose-derived stem cells contribute to chondrogenesis in coculture with human articular chondrocytes.
- Authors
- Hildner F, Concaro S, Peterbauer A, Wolbank S, Danzer M, Lindahl A, Gatenholm P, Redl H, van Griensven M
- Journal
- Tissue Eng Part A - Page No 3961 (Tue Dec 01 00:00:00 UTC 2009)
- Volume (Year)
- 15 (2009)
- Product Usage
- -
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